Thioredoxin pfam
WebPfam: Thioredoxin_3: 136: 223: 24.8: 24.8: 79.5: 55.6: 1.7e-18: 4.9e-11: Show or hide domain scores. Sequence information. This is the amino acid sequence of the UniProt sequence database entry with the accession Q51760. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we ... Webpfam00085 (PSSM ID: 395038): Conserved Protein Domain Family Thioredoxin, Thioredoxins are small enzymes that participate in redox reactions, via the reversible oxidation of an active centre disulfide bond
Thioredoxin pfam
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WebApr 26, 2004 · Thioredoxin-like protein 4A. Alternative names. DIM1 protein homolog 2 publications. Spliceosomal U5 snRNP-specific 15 kDa protein 1 publication. ... Pfam. View protein in Pfam; PF02966 DIM1 1 hit; SMART. View protein in SMART; SM01410 DIM1 1 hit; SUPFAM. SSF52833 Thioredoxin-like 1 hit; MobiDB. WebThioredoxin serves as a general protein disulfide oxidoreductase. It interacts with a broad range of proteins by a redox mechanism based on reversible oxidation of 2 cysteine thiol …
WebFor those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from PDBe, to allow us to map Pfam domains onto UniProt three-dimensional structures.The table below shows the sequences and Pfam domains that correspond to this structure. Webto any of the hidden Markov models of the Pfam thio-redoxin clan (CL0172) with a score below 10−5 (11). Of these 22,860 matches, we removed all 18,187 sequences that did not include an unambiguous start methionine or a stop codon. These incomplete thioredoxin sequences were excluded, as it is not possible to synthesize a functional gene
Webfive protein families is somewhat smaller than thioredoxin itself, having one less 13-strand and one less a-helix. The sequence identity between the five protein classes does not suggest a close structural similarity. ... and thioredoxin (108 residues) are single-domain mono-meric proteins: glutaredoxin has little structure in addi- ... http://pfam-legacy.xfam.org/protein/A2SRN0_METLZ
WebThioredoxins are small disulphide-containing redox proteins that have been found in all the kingdoms of living organisms. Thioredoxin serves as a general protein disulphide …
WebGlutaredoxin. Glutaredoxins [1] [2] [3] (also known as Thioltransferase) are small redox enzymes of approximately one hundred amino-acid residues that use glutathione as a cofactor. In humans this oxidation repair enzyme is also known to participate in many cellular functions, including redox signaling and regulation of glucose metabolism. burled maple tapered standhttp://pfam-legacy.xfam.org/clan/Thioredoxin burled oak rocking chairWebThioredoxin-like ferredoxins. The Fe 2 S 2 ferredoxin from Clostridium pasteurianum (Cp2FeFd; ) has been recognized as distinct protein family on the basis of its amino acid sequence, spectroscopic properties of its iron–sulfur cluster and the unique ligand swapping ability of two cysteine ligands to the [Fe 2 S 2 ... Pfam structures / ECOD ... burled ironWebThe functions of BdbA and BdbB are more ambiguous. Like BdbC and BdbD, BdbA is a membrane-anchored TDOR, and BdbB is an integral membrane protein. However, BdbA belongs to the thioredoxin Pfam family and is similar to other bacteriocin-associated TDORs (Figure 1B). Indeed, BdbA and BdbB are encoded in an operon with the bacteriocin … burled maple picsWebThe majority of thioredoxin superfamily members can be categorized into three major functional groups: thiol-disulfide reductases, which donate electrons in reduction reactions, oxidases, which accept electrons and oxidize their substrates, or isomerases, which rearrange disulfide bonds in substrate proteins. burled oak furnitureWebJan 1, 2024 · The sequences from this nonredundant GOS data set were then matched to hidden Markov models of the Pfam thioredoxin clan CL0172 using HMMER (version 3.0) (11, 31). All sequences that matched with a score below 10 −5 were considered for further analysis. Sequences that did not contain an unambiguous start or stop codon in their … burled maple tapered stand for a sculptureWebThioredoxin (Trx) is a thermostable, 12-kDa intracellular E. coli protein that is easily overexpressed and soluble even when overexpressed up to 40% of the total cellular … halo infinite forge beta